EnhancerDB
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Enhancers that have rs6689149[chr1:201505945]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201492445 201517481 enh12522
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs6689149[chr1:201505945]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856607
chr1 201504593 201515974 ZNF143 GTRD no Epithelial (MCF-7) 107856608
chr1 201504923 201508385 ZNF274 GTRD no Cervix (HeLa-S3) 21364520
chr1 201505038 201507486 ZNF274 GTRD no Cervix (HeLa-S3) 21364521
chr1 201505038 201507492 ZNF274 GTRD no Cervix (HeLa-S3) 21364522
chr1 201505073 201508220 ZNF274 GTRD no Cervix (HeLa-S3) 21364523
chr1 201505145 201507383 ZNF274 GTRD no Cervix (HeLa-S3) 21364524
chr1 201505219 201506013 ZNF274 GTRD no Cervix (HeLa-S3) 21364526
chr1 201505224 201507532 ZNF274 GTRD no Cervix (HeLa-S3) 21364527
chr1 201505228 201509085 ZNF143 GTRD no Epithelial (MCF-7) 107856609
chr1 201505246 201506018 ERG GTRD no Prostate (RWPE1) 21364528
chr1 201505284 201508115 ZNF274 GTRD no Cervix (HeLa-S3) 21364529
chr1 201505347 201506035 ZNF274 GTRD no Cervix (HeLa-S3) 21364531
chr1 201505417 201507553 ZNF274 GTRD no Cervix (HeLa-S3) 21364534
chr1 201505588 201506052 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21364535
chr1 201505612 201505952 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21364536
chr1 201505637 201505957 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21364537
chr1 201505658 201506042 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21364538
chr1 201505779 201506023 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21364539
chr1 201505820 201506096 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21364540
chr1 201505932 201505947 ZIC3 JASPAR yes 34503728
chr1 201505937 201505948 E2F1 JASPAR yes 34503729
Genes associated with rs6689149[chr1:201505945], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More