EnhancerDB
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  3. rs6690450[chr1:54854079]
Enhancers that have rs6690450[chr1:54854079]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs6690450[chr1:54854079]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54854079 54854087 OTX1 JASPAR yes 28981499
chr1 54854079 54854087 OTX2 JASPAR yes 28981500
chr1 54854079 54854087 RHOXF1 JASPAR yes 28981501
chr1 54854079 54854088 PITX3 JASPAR yes 28981502
Genes associated with rs6690450[chr1:54854079], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More