EnhancerDB
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  3. rs6692054[chr1:225651400]
Enhancers that have rs6692054[chr1:225651400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6692054[chr1:225651400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225650829 225656613 ZBTB33 GTRD no Lung (A549) 107874230
chr1 225651064 225652472 ZNF274 GTRD no Cervix (HeLa-S3) 21384815
chr1 225651086 225654242 ZBTB33 GTRD no Brain (SK-N-SH) 21384816
chr1 225651110 225652296 ZBTB33 GTRD no Brain (SK-N-SH) 21384817
chr1 225651124 225656651 ZBTB33 GTRD no Lung (A549) 107874231
chr1 225651132 225652373 ZNF274 GTRD no Cervix (HeLa-S3) 21384818
chr1 225651156 225656546 ZBTB33 GTRD no Lung (A549) 107874232
chr1 225651177 225654374 ZBTB33 GTRD no Brain (SK-N-SH) 21384819
chr1 225651185 225652392 ZNF274 GTRD no Cervix (HeLa-S3) 21384820
chr1 225651222 225652228 ZNF274 GTRD no Cervix (HeLa-S3) 21384821
chr1 225651276 225652164 ZNF274 GTRD no Cervix (HeLa-S3) 21384822
chr1 225651295 225652673 ZBTB33 GTRD no Brain (SK-N-SH) 21384823
chr1 225651325 225651894 ZBTB33 GTRD no Brain (SK-N-SH) 21384824
chr1 225651326 225653435 ZNF274 GTRD no Cervix (HeLa-S3) 21384825
chr1 225651333 225654603 ZBTB33 GTRD no Brain (SK-N-SH) 21384826
chr1 225651350 225651743 ZBTB33 GTRD no Brain (SK-N-SH) 21384827
chr1 225651356 225654907 ZBTB33 GTRD no Lung (A549) 107874233
chr1 225651361 225652330 ZNF274 GTRD no Cervix (HeLa-S3) 21384828
chr1 225651368 225652859 ZNF274 GTRD no Liver (HepG2) 21384829
chr1 225651370 225652701 ZBTB33 GTRD no Brain (SK-N-SH) 21384830
chr1 225651398 225651408 ERF JASPAR yes 35743670
chr1 225651398 225651408 ERG JASPAR yes 35743671
chr1 225651398 225651408 ETS1 JASPAR yes 35743672
Genes associated with rs6692054[chr1:225651400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More