EnhancerDB
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  3. rs6698260[chr1:54773581]
Enhancers that have rs6698260[chr1:54773581]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs6698260[chr1:54773581]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54773573 54773586 TFAP2A JASPAR yes 28971464
chr1 54773573 54773586 TFAP2B JASPAR yes 28971465
chr1 54773573 54773586 TFAP2C JASPAR yes 28971466
chr1 54773573 54773588 TFAP2A JASPAR yes 28971467
Genes associated with rs6698260[chr1:54773581], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More