EnhancerDB
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  3. rs6699909[chr1:212092196]
Enhancers that have rs6699909[chr1:212092196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs6699909[chr1:212092196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212091596 212092217 ZNF274 GTRD no Cervix (HeLa-S3) 21377575
chr1 212092178 212092199 IRF1 JASPAR yes 35091311
chr1 212092180 212092201 IRF1 JASPAR yes 35091312
chr1 212092182 212092203 ZNF263 JASPAR yes 35091313
chr1 212092186 212092207 IRF1 JASPAR yes 35091314
chr1 212092186 212092207 ZNF263 JASPAR yes 35091315
chr1 212092190 212092211 IRF1 JASPAR yes 35091316
chr1 212092194 212092215 IRF1 JASPAR yes 35091317
Genes associated with rs6699909[chr1:212092196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More