EnhancerDB
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  3. rs6709020[chr2:121689574]
Enhancers that have rs6709020[chr2:121689574]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 121660105 121703500 enh18849
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6709020[chr2:121689574]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 121689564 121689579 TFAP2A JASPAR yes 76590517
chr2 121689564 121689579 TFAP2C JASPAR yes 76590518
chr2 121689567 121689579 TFAP2A JASPAR yes 76590519
chr2 121689567 121689579 TFAP2B JASPAR yes 76590520
chr2 121689567 121689579 TFAP2C JASPAR yes 76590521
chr2 121689568 121689577 TFAP2A JASPAR yes 76590522
Genes associated with rs6709020[chr2:121689574], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr2 120997640 121052289 + RALB ENSG00000144118.9 120997640 637285 Adrenal 0.0376842 2730