EnhancerDB
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  3. rs6720012[chr2:26302193]
Enhancers that have rs6720012[chr2:26302193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26273785 26313195 enh5372
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs6720012[chr2:26302193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26302178 26302198 RREB1 JASPAR yes 72523232
chr2 26302180 26302200 RREB1 JASPAR yes 72523233
chr2 26302182 26302202 RREB1 JASPAR yes 72523234
chr2 26302183 26302203 RREB1 JASPAR yes 72523235
chr2 26302186 26302206 RREB1 JASPAR yes 72523236
chr2 26302187 26302199 FOXI1 JASPAR yes 72523237
chr2 26302188 26302208 RREB1 JASPAR yes 72523238
chr2 26302190 26302210 RREB1 JASPAR yes 72523239
chr2 26302191 26302197 HiNF-A TRANSFAC yes 72523240
chr2 26302192 26302212 RREB1 JASPAR yes 72523241
Genes associated with rs6720012[chr2:26302193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More