EnhancerDB
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  3. rs6729648[chr2:69139626]
Enhancers that have rs6729648[chr2:69139626]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 69131784 69143115 enh5635
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs6729648[chr2:69139626]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 69139624 69139637 ELF1 JASPAR yes 74807820
chr2 69139625 69139635 ELK1 JASPAR yes 74807821
chr2 69139625 69139637 EHF JASPAR yes 74807822
chr2 69139625 69139637 ELF1 JASPAR yes 74807823
chr2 69139625 69139638 ELF3 JASPAR yes 74807824
chr2 69139626 69139637 ELF5 JASPAR yes 74807825
Genes associated with rs6729648[chr2:69139626], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr2 68686551 68694390 - FBXO48 ENSG00000204923.3 68694390 445236 Esophagus 0.319958 2416