EnhancerDB
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  3. rs67561323[chr1:209585775]
Enhancers that have rs67561323[chr1:209585775]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs67561323[chr1:209585775]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209584773 209586664 AR GTRD no Prostate (PC-3) 21375296
chr1 209584773 209586664 AR GTRD no Prostate (PC-3) 107865744
chr1 209585514 209585822 STAT3 UCSC Txn Factor no Conserved 107865745
chr1 209585522 209586095 ZBTB33 GTRD no Brain (SK-N-SH) 107865746
chr1 209585531 209586726 ZBTB33 GTRD no Brain (SK-N-SH) 107865747
chr1 209585533 209586691 ZBTB33 GTRD no Brain (SK-N-SH) 107865748
chr1 209585538 209588619 ZBTB33 GTRD no Brain (SK-N-SH) 107865749
chr1 209585539 209586116 ZBTB33 GTRD no Lung (A549) 21375297
chr1 209585539 209586116 ZBTB33 GTRD no Lung (A549) 107865750
chr1 209585559 209585823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21375298
chr1 209585559 209585823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107865751
chr1 209585559 209586055 ZBTB33 GTRD no Lung (A549) 21375299
chr1 209585559 209586055 ZBTB33 GTRD no Lung (A549) 107865752
chr1 209585572 209585930 TCF7L2 GTRD no Colon (HCT116) 21375300
chr1 209585572 209585930 TCF7L2 GTRD no Colon (HCT116) 107865753
chr1 209585587 209586121 ZBTB33 GTRD no Brain (SK-N-SH) 107865754
chr1 209585625 209586024 TCF7L2 GTRD no Colon (HCT116) 21375301
chr1 209585625 209586024 TCF7L2 GTRD no Colon (HCT116) 107865755
chr1 209585629 209586093 SOX2 GTRD no Neural Stem Cells (H9) 21375302
chr1 209585629 209586093 SOX2 GTRD no Neural Stem Cells (H9) 107865756
chr1 209585642 209586174 TCF7L2 GTRD no Colon (HCT116) 21375303
chr1 209585642 209586174 TCF7L2 GTRD no Colon (HCT116) 107865757
chr1 209585656 209586134 ZBTB33 GTRD no Lung (A549) 21375304
chr1 209585656 209586134 ZBTB33 GTRD no Lung (A549) 107865758
chr1 209585674 209586064 SOX2 GTRD no Neural Stem Cells (H9) 21375305
chr1 209585674 209586064 SOX2 GTRD no Neural Stem Cells (H9) 107865759
chr1 209585685 209586140 TCF7L2 GTRD no Colon (HCT116) 21375306
chr1 209585685 209586140 TCF7L2 GTRD no Colon (HCT116) 107865760
chr1 209585705 209586232 ZBTB33 GTRD no Lung (A549) 21375307
chr1 209585705 209586232 ZBTB33 GTRD no Lung (A549) 107865761
chr1 209585709 209586105 ZBTB33 GTRD no Lung (A549) 21375308
chr1 209585709 209586105 ZBTB33 GTRD no Lung (A549) 107865762
chr1 209585719 209585992 SOX2 GTRD no Neural Stem Cells (H9) 21375309
chr1 209585719 209585992 SOX2 GTRD no Neural Stem Cells (H9) 107865763
chr1 209585764 209586177 ZBTB33 GTRD no Lung (A549) 21375310
Genes associated with rs67561323[chr1:209585775], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More