EnhancerDB
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  3. rs675876[chr15:45936856]
Enhancers that have rs675876[chr15:45936856]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 45921685 45943627 enh16095
Liver Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs675876[chr15:45936856]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 45936845 45936857 NHLH1 JASPAR yes 23144178
chr15 45936846 45936856 ID4 JASPAR yes 23144179
chr15 45936846 45936856 NHLH1 JASPAR yes 23144180
chr15 45936846 45936856 TCF3 JASPAR yes 23144181
chr15 45936846 45936856 TCF4 JASPAR yes 23144182
chr15 45936847 45936856 SNAI2 JASPAR yes 23144183
chr15 45936855 45936870 NR2C2 JASPAR yes 23144185
chr15 45936856 45936870 RXRB JASPAR yes 23144186
chr15 45936856 45936870 RXRG JASPAR yes 23144187
Genes associated with rs675876[chr15:45936856], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More