EnhancerDB
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  3. rs6789475[chr3:176866801]
Enhancers that have rs6789475[chr3:176866801]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 176855125 176871295 enh7690
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6789475[chr3:176866801]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 176866789 176866810 IRF1 JASPAR yes 7839398
chr3 176866790 176866805 FOXP1 JASPAR yes 7839399
chr3 176866790 176866811 IRF1 JASPAR yes 7839400
chr3 176866794 176866815 IRF1 JASPAR yes 7839401
chr3 176866795 176866810 FOXP1 JASPAR yes 7839402
chr3 176866795 176866816 IRF1 JASPAR yes 7839403
chr3 176866799 176866814 STAT2 JASPAR yes 7839404
chr3 176866800 176866815 FOXP1 JASPAR yes 7839405
chr3 176866800 176866821 IRF1 JASPAR yes 7839406
Genes associated with rs6789475[chr3:176866801], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More