EnhancerDB
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  3. rs68124406[chr1:16492061]
Enhancers that have rs68124406[chr1:16492061]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs68124406[chr1:16492061]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16492051 16492062 SPDEF JASPAR yes 27029998
chr1 16492058 16492070 TFAP2A JASPAR yes 27029999
chr1 16492058 16492073 NR2C2 JASPAR yes 27030000
Genes associated with rs68124406[chr1:16492061], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More