EnhancerDB
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  3. rs682112[chr1:201746768]
Enhancers that have rs682112[chr1:201746768]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201710292 201749335 enh12527
Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs682112[chr1:201746768]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201738150 201746951 ZNF143 GTRD no Epithelial (MCF-7) 107857100
chr1 201738150 201746951 ZNF143 GTRD no Epithelial (MCF-7) 107857101
chr1 201738150 201746951 ZNF143 GTRD no Epithelial (MCF-7) 107857102
chr1 201746751 201746771 RREB1 JASPAR yes 34532464
chr1 201746753 201746773 RREB1 JASPAR yes 34532465
chr1 201746756 201746776 RREB1 JASPAR yes 34532466
chr1 201746759 201746779 RREB1 JASPAR yes 34532467
chr1 201746762 201746782 RREB1 JASPAR yes 34532469
chr1 201746765 201746785 RREB1 JASPAR yes 34532470
Genes associated with rs682112[chr1:201746768], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 201328136 201346890 - TNNT2 ENSG00000118194.14 201346890 399878 Esophagus 0.291576 1704