EnhancerDB
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  3. rs6873483[chr5:154160607]
Enhancers that have rs6873483[chr5:154160607]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 154145125 154165844 enh8815
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6873483[chr5:154160607]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 154160603 154160616 SMAD2 JASPAR yes 67058156
Genes associated with rs6873483[chr5:154160607], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr5 154092462 154197167 + LARP1 ENSG00000155506.12 154092462 0 Esophagus 0.178053 5911