EnhancerDB
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  3. rs6880301[chr5:149882563]
Enhancers that have rs6880301[chr5:149882563]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149879585 149898040 enh22717
Bone Marrow (K562) Colon (HCT116) Adrenal Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs6880301[chr5:149882563]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149882546 149882565 PAX5 JASPAR yes 66885074
chr5 149882547 149882567 ESR1 JASPAR yes 66885076
chr5 149882550 149882570 TP53 JASPAR yes 66885078
chr5 149882552 149882572 TP63 JASPAR yes 66885079
chr5 149882553 149882571 TP53 JASPAR yes 66885080
chr5 149882553 149882571 TP73 JASPAR yes 66885081
chr5 149882554 149882569 TP53 JASPAR yes 66885082
chr5 149882555 149882570 TP53 JASPAR yes 66885083
chr5 149882562 149882566 LFA1 TRANSFAC yes 66885084
Genes associated with rs6880301[chr5:149882563], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More