EnhancerDB
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  3. rs6883730[chr5:78044170]
Enhancers that have rs6883730[chr5:78044170]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78038905 78058872 enh8512
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs6883730[chr5:78044170]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78044156 78044171 NR2C2 JASPAR yes 63620958
chr5 78044157 78044171 RXRB JASPAR yes 63620959
chr5 78044157 78044171 RXRG JASPAR yes 63620960
chr5 78044158 78044178 ESR1 JASPAR yes 63620961
Genes associated with rs6883730[chr5:78044170], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More