EnhancerDB
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  3. rs6886571[chr5:154150451]
Enhancers that have rs6886571[chr5:154150451]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 154145125 154165844 enh8815
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs6886571[chr5:154150451]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 154150443 154150456 NFKB1 JASPAR yes 67056795
chr5 154150445 154150451 ZNF354C JASPAR yes 67056796
chr5 154150448 154150459 USF1 JASPAR yes 67056797
chr5 154150448 154150459 USF2 JASPAR yes 67056798
chr5 154150449 154150459 SREBF2 JASPAR yes 67056799
chr5 154150451 154150456 USF2 TRANSFAC yes 67056800
Genes associated with rs6886571[chr5:154150451], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More