EnhancerDB
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  3. rs6896889[chr5:172177288]
Enhancers that have rs6896889[chr5:172177288]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172156284 172181075 enh22815
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs6896889[chr5:172177288]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172177284 172177290 SP1 TRANSFAC yes 67822104
chr5 172177284 172177294 SP1 JASPAR yes 67822105
chr5 172177287 172177306 CTCF JASPAR yes 67822106
Genes associated with rs6896889[chr5:172177288], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More