EnhancerDB
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  3. rs6909440[chr6:33564636]
Enhancers that have rs6909440[chr6:33564636]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs6909440[chr6:33564636]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33564627 33564643 T JASPAR yes 101158832
chr6 33564629 33564649 TP53 JASPAR yes 101158833
chr6 33564631 33564643 HES5 JASPAR yes 101158834
chr6 33564631 33564643 HES7 JASPAR yes 101158835
chr6 33564631 33564643 PKNOX2 JASPAR yes 101158836
chr6 33564631 33564651 TP63 JASPAR yes 101158837
chr6 33564632 33564650 TP53 JASPAR yes 101158838
chr6 33564632 33564650 TP63 JASPAR yes 101158839
chr6 33564632 33564650 TP73 JASPAR yes 101158840
chr6 33564633 33564648 TP53 JASPAR yes 101158841
chr6 33564633 33564653 TP53 JASPAR yes 101158842
chr6 33564634 33564649 TP53 JASPAR yes 101158843
chr6 33564635 33564646 FOXA1 JASPAR yes 101158844
chr6 33564635 33564650 FOXA1 JASPAR yes 101158845
chr6 33564636 33564645 NFIX JASPAR yes 101158846
chr6 33564636 33564646 NFIA JASPAR yes 101158847
Genes associated with rs6909440[chr6:33564636], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More