EnhancerDB
  1. Home
  2. SNP
  3. rs6939397[chr6:136724406]
Enhancers that have rs6939397[chr6:136724406]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 136720948 136731615 enh23648
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Epithelial (MCF-7)
chr6 136724164 136724966 vista53666
VISTA
Transcript factors that have rs6939397[chr6:136724406]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 136724072 136725115 EP300 UCSC Txn Factor no Conserved 108541763
chr6 136724117 136724775 TCF12 UCSC Txn Factor no Conserved 108541764
chr6 136724151 136724556 RCOR1 UCSC Txn Factor no Conserved 108541766
chr6 136724175 136724468 TFAP2C UCSC Txn Factor no Conserved 108541767
chr6 136724175 136724556 STAT1 UCSC Txn Factor no Conserved 108541768
chr6 136724184 136724534 STAT5A UCSC Txn Factor no Conserved 108541769
chr6 136724204 136724531 STAT3 UCSC Txn Factor no Conserved 108541770
chr6 136724218 136724690 BCL3 UCSC Txn Factor no Conserved 108541771
chr6 136724221 136724647 JUND UCSC Txn Factor no Conserved 108541772
chr6 136724250 136724713 FOSL2 UCSC Txn Factor no Conserved 108541773
chr6 136724269 136724590 ATF3 UCSC Txn Factor no Conserved 108541774
chr6 136724285 136724541 ATF1 UCSC Txn Factor no Conserved 108541775
chr6 136724297 136724617 MAFK UCSC Txn Factor no Conserved 108541776
chr6 136724308 136724623 CEBPB UCSC Txn Factor no Conserved 108541777
chr6 136724320 136724584 SIX5 UCSC Txn Factor no Conserved 108541778
chr6 136724392 136724406 GATA2 JASPAR yes 70442087
chr6 136724392 136724406 GATA2 JASPAR yes 105572038
chr6 136724402 136724407 MYC TRANSFAC yes 70442088
chr6 136724402 136724407 MYC TRANSFAC yes 105572039
Genes associated with rs6939397[chr6:136724406], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More