EnhancerDB
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Enhancers that have rs699727[chr1:117265154]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117246825 117269613 enh43034
Skin (Keratinocyte) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs699727[chr1:117265154]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117264844 117266071 ZNF143 GTRD no Epithelial (MCF-7) 21333611
chr1 117264872 117266098 ZNF143 GTRD no Epithelial (MCF-7) 21333612
chr1 117264881 117265972 ZNF143 GTRD no Epithelial (MCF-7) 21333613
chr1 117265005 117265679 ZNF143 GTRD no Epithelial (MCF-7) 21333614
chr1 117265062 117265737 ZNF143 GTRD no Epithelial (MCF-7) 21333615
chr1 117265067 117265655 ZNF143 GTRD no Epithelial (MCF-7) 21333616
chr1 117265125 117265724 ZNF143 GTRD no Epithelial (MCF-7) 21333617
chr1 117265126 117265808 ZNF143 GTRD no Epithelial (MCF-7) 21333618
chr1 117265151 117265164 EOMES JASPAR yes 31832294
chr1 117265153 117265164 TBX20 JASPAR yes 31832295
chr1 117265154 117265164 TBX21 JASPAR yes 31832296
Genes associated with rs699727[chr1:117265154], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More