EnhancerDB
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  3. rs71072200[chr3:56893727]
Enhancers that have rs71072200[chr3:56893727]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56877665 56906735 enh35421
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Lung (PC-9) Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs71072200[chr3:56893727]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56893721 56893742 IRF1 JASPAR yes 2604632
chr3 56893722 56893743 IRF1 JASPAR yes 2604633
chr3 56893726 56893741 FOXP1 JASPAR yes 2604634
chr3 56893727 56893742 FOXP1 JASPAR yes 2604635
Genes associated with rs71072200[chr3:56893727], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More