EnhancerDB
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Enhancers that have rs71074[chr1:229003739]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228982305 229013678 enh12753
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Blood (T-cell) Astrocyte Lung (A549) Stomach Placenta Breast Uterus Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs71074[chr1:229003739]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229002735 229004430 ZNF274 GTRD no Liver (HepG2) 21389133
chr1 229002789 229004539 ZNF274 GTRD no Liver (HepG2) 21389134
chr1 229003105 229004204 ZNF143 GTRD no Epithelial (MCF-7) 21389137
chr1 229003178 229004391 ZNF143 GTRD no Epithelial (MCF-7) 21389138
chr1 229003189 229004229 ZNF143 GTRD no Epithelial (MCF-7) 21389139
chr1 229003195 229004156 ZNF143 GTRD no Epithelial (MCF-7) 21389140
chr1 229003211 229004179 ZNF143 GTRD no Epithelial (MCF-7) 21389141
chr1 229003230 229004178 ZNF274 GTRD no Liver (HepG2) 21389142
chr1 229003242 229004141 ZNF143 GTRD no Epithelial (MCF-7) 21389143
chr1 229003252 229004202 ZNF274 GTRD no Liver (HepG2) 21389144
chr1 229003253 229004187 ZNF274 GTRD no Liver (HepG2) 21389145
chr1 229003257 229004188 ZNF274 GTRD no Liver (HepG2) 21389146
chr1 229003267 229004226 ZNF143 GTRD no Epithelial (MCF-7) 21389147
chr1 229003293 229004248 ZNF143 GTRD no Epithelial (MCF-7) 21389148
chr1 229003295 229003947 ZNF143 GTRD no Epithelial (MCF-7) 21389149
chr1 229003296 229004150 ZNF143 GTRD no Epithelial (MCF-7) 21389150
chr1 229003298 229004263 ZNF143 GTRD no Epithelial (MCF-7) 21389151
chr1 229003316 229004155 ZNF274 GTRD no Liver (HepG2) 21389152
chr1 229003320 229004373 ZNF274 GTRD no Liver (HepG2) 21389153
chr1 229003325 229004091 ZNF274 GTRD no Liver (HepG2) 21389154
chr1 229003327 229004140 ZNF274 GTRD no Liver (HepG2) 21389155
chr1 229003339 229004178 ZNF274 GTRD no Liver (HepG2) 21389156
chr1 229003341 229004394 ZNF274 GTRD no Liver (HepG2) 21389157
chr1 229003345 229004055 ZNF143 GTRD no Epithelial (MCF-7) 21389158
chr1 229003348 229003979 ZNF274 GTRD no Liver (HepG2) 21389159
chr1 229003350 229003976 ZNF143 GTRD no Epithelial (MCF-7) 21389160
chr1 229003352 229003956 ZNF274 GTRD no Liver (HepG2) 21389161
chr1 229003358 229004168 ZNF274 GTRD no Liver (HepG2) 21389162
chr1 229003363 229004087 ZNF274 GTRD no Liver (HepG2) 21389163
chr1 229003364 229003860 ZNF274 GTRD no Liver (HepG2) 21389164
chr1 229003370 229004133 ZNF274 GTRD no Liver (HepG2) 21389165
chr1 229003392 229004195 ZNF274 GTRD no Liver (HepG2) 21389166
chr1 229003416 229003955 ZNF274 GTRD no Liver (HepG2) 21389167
chr1 229003445 229003876 ZNF274 GTRD no Liver (HepG2) 21389168
chr1 229003449 229003914 ZNF143 GTRD no Epithelial (MCF-7) 21389169
chr1 229003459 229004028 ZNF143 GTRD no Epithelial (MCF-7) 21389170
chr1 229003465 229003959 ZNF143 GTRD no Epithelial (MCF-7) 21389171
chr1 229003472 229004372 ZNF274 GTRD no Liver (HepG2) 21389172
chr1 229003478 229004111 ZNF143 GTRD no Epithelial (MCF-7) 21389173
chr1 229003481 229004013 ZNF274 GTRD no Liver (HepG2) 21389174
chr1 229003486 229004159 ZNF274 GTRD no Liver (HepG2) 21389175
chr1 229003512 229004066 ZNF143 GTRD no Epithelial (MCF-7) 21389176
chr1 229003534 229004085 ZNF143 GTRD no Epithelial (MCF-7) 21389177
chr1 229003556 229004111 ZNF274 GTRD no Liver (HepG2) 21389178
chr1 229003557 229003912 ZNF274 GTRD no Liver (HepG2) 21389179
chr1 229003595 229004121 ZNF143 GTRD no Epithelial (MCF-7) 21389180
chr1 229003732 229003752 RREB1 JASPAR yes 35938306
chr1 229003736 229003741 SP1 TRANSFAC yes 35938307
chr1 229003737 229003751 PLAG1 JASPAR yes 35938308
chr1 229003738 229003749 TBX20 JASPAR yes 35938309
chr1 229003739 229003747 MGA JASPAR yes 35938310
chr1 229003739 229003747 TBX15 JASPAR yes 35938311
chr1 229003739 229003747 TBX1 JASPAR yes 35938312
chr1 229003739 229003747 TBX4 JASPAR yes 35938313
chr1 229003739 229003747 TBX5 JASPAR yes 35938314
Genes associated with rs71074[chr1:229003739], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More