EnhancerDB
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  3. rs71138336[chr1:201421691]
Enhancers that have rs71138336[chr1:201421691]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201414985 201433510 enh875
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71138336[chr1:201421691]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201421579 201423197 MEF2B GTRD no Blood (Karpas-422) 21364046
chr1 201421614 201422613 ZNF143 GTRD no Epithelial (MCF-7) 21364047
chr1 201421680 201421695 FOXP1 JASPAR yes 34495065
chr1 201421681 201421702 IRF1 JASPAR yes 34495066
chr1 201421682 201421694 FOXC2 JASPAR yes 34495067
chr1 201421682 201421702 RREB1 JASPAR yes 34495068
chr1 201421683 201421694 FOXP2 JASPAR yes 34495069
chr1 201421687 201421702 FOXP1 JASPAR yes 34495070
chr1 201421687 201421707 RREB1 JASPAR yes 34495071
chr1 201421688 201421709 IRF1 JASPAR yes 34495072
chr1 201421689 201421709 RREB1 JASPAR yes 34495073
Genes associated with rs71138336[chr1:201421691], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More