EnhancerDB
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  3. rs71158349[chr17:62956402]
Enhancers that have rs71158349[chr17:62956402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71158349[chr17:62956402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62952883 62958112 ZNF143 GTRD no Epithelial (MCF-7) 21779990
chr17 62953744 62957520 ZNF143 GTRD no Epithelial (MCF-7) 21779992
chr17 62954118 62958130 ZNF143 GTRD no Epithelial (MCF-7) 21779997
chr17 62954223 62957434 ZNF143 GTRD no Epithelial (MCF-7) 21779998
chr17 62954931 62957350 ZNF143 GTRD no Epithelial (MCF-7) 21780000
chr17 62955084 62956769 ZNF143 GTRD no Epithelial (MCF-7) 21780001
chr17 62955250 62956499 ZNF143 GTRD no Epithelial (MCF-7) 21780002
chr17 62955384 62956504 ZNF143 GTRD no Epithelial (MCF-7) 21780004
chr17 62955499 62957071 ZNF143 GTRD no Epithelial (MCF-7) 21780009
chr17 62955505 62956991 ZNF143 GTRD no Epithelial (MCF-7) 21780010
chr17 62955518 62956567 ZNF143 GTRD no Epithelial (MCF-7) 21780011
chr17 62955533 62956751 ZNF143 GTRD no Epithelial (MCF-7) 21780012
chr17 62955572 62956433 ZNF143 GTRD no Epithelial (MCF-7) 21780013
chr17 62955659 62956774 ZNF143 GTRD no Epithelial (MCF-7) 21780014
chr17 62955661 62956853 ZNF143 GTRD no Epithelial (MCF-7) 21780015
chr17 62955666 62956417 ZNF143 GTRD no Epithelial (MCF-7) 21780016
chr17 62955690 62956889 ZNF143 GTRD no Epithelial (MCF-7) 21780017
chr17 62955690 62956896 ZNF143 GTRD no Epithelial (MCF-7) 21780018
chr17 62955701 62956456 ZNF143 GTRD no Epithelial (MCF-7) 21780019
chr17 62955728 62956429 ZNF143 GTRD no Epithelial (MCF-7) 21780021
chr17 62955731 62956550 ZNF143 GTRD no Epithelial (MCF-7) 21780022
chr17 62955800 62956448 ZNF143 GTRD no Epithelial (MCF-7) 21780023
chr17 62955875 62956506 ZNF143 GTRD no Epithelial (MCF-7) 21780024
chr17 62955887 62956576 ZNF143 GTRD no Epithelial (MCF-7) 21780025
chr17 62955898 62956583 ZNF143 GTRD no Epithelial (MCF-7) 21780026
chr17 62956343 62957109 ZNF143 GTRD no Epithelial (MCF-7) 21780028
chr17 62956357 62956986 ZNF143 GTRD no Epithelial (MCF-7) 21780029
chr17 62956361 62956961 ZNF143 GTRD no Epithelial (MCF-7) 21780030
chr17 62956381 62956402 IRF1 JASPAR yes 55331379
chr17 62956385 62956406 IRF1 JASPAR yes 55331384
chr17 62956386 62956407 IRF1 JASPAR yes 55331386
chr17 62956387 62956402 STAT2 JASPAR yes 55331387
chr17 62956390 62956405 FOXP1 JASPAR yes 55331388
chr17 62956390 62956411 IRF1 JASPAR yes 55331389
chr17 62956391 62956406 FOXP1 JASPAR yes 55331390
chr17 62956391 62956412 IRF1 JASPAR yes 55331391
chr17 62956392 62956413 IRF1 JASPAR yes 55331392
chr17 62956395 62956409 SPIC JASPAR yes 55331393
chr17 62956396 62956417 IRF1 JASPAR yes 55331394
chr17 62956398 62956403 ETS2 TRANSFAC yes 55331395
chr17 62956401 62956416 FOXP1 JASPAR yes 55331396
Genes associated with rs71158349[chr17:62956402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More