EnhancerDB
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  3. rs71168392[chr1:224395269]
Enhancers that have rs71168392[chr1:224395269]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs71168392[chr1:224395269]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224395255 224395270 FOXP1 JASPAR yes 35694022
chr1 224395256 224395271 FOXP1 JASPAR yes 35694023
chr1 224395257 224395272 FOXP1 JASPAR yes 35694024
chr1 224395257 224395278 IRF1 JASPAR yes 35694025
chr1 224395258 224395273 FOXP1 JASPAR yes 35694026
chr1 224395258 224395279 IRF1 JASPAR yes 35694027
chr1 224395259 224395274 FOXP1 JASPAR yes 35694028
chr1 224395261 224395276 FOXP1 JASPAR yes 35694029
chr1 224395262 224395283 IRF1 JASPAR yes 35694030
chr1 224395263 224395278 FOXP1 JASPAR yes 35694031
chr1 224395264 224395285 IRF1 JASPAR yes 35694032
Genes associated with rs71168392[chr1:224395269], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More