EnhancerDB
  1. Home
  2. SNP
  3. rs71171089[chr18:55430629]
Enhancers that have rs71171089[chr18:55430629]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55430385 55468195 enh17731
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71171089[chr18:55430629]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55430615 55430635 RREB1 JASPAR yes 110882145
chr18 55430623 55430638 FOXP1 JASPAR yes 110882146
chr18 55430624 55430639 FOXP1 JASPAR yes 110882147
chr18 55430625 55430640 FOXP1 JASPAR yes 110882148
chr18 55430625 55430646 IRF1 JASPAR yes 110882149
chr18 55430626 55430641 FOXP1 JASPAR yes 110882150
chr18 55430627 55430642 FOXP1 JASPAR yes 110882151
Genes associated with rs71171089[chr18:55430629], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More