EnhancerDB
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  3. rs71367066[chr17:79548401]
Enhancers that have rs71367066[chr17:79548401]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79539405 79553215 enh32380
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs71367066[chr17:79548401]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79548380 79548401 IRF1 JASPAR yes 56335058
chr17 79548381 79548402 IRF1 JASPAR yes 56335060
chr17 79548382 79548403 IRF1 JASPAR yes 56335062
chr17 79548383 79548404 IRF1 JASPAR yes 56335064
chr17 79548384 79548405 IRF1 JASPAR yes 56335066
chr17 79548385 79548406 IRF1 JASPAR yes 56335068
chr17 79548386 79548401 FOXP1 JASPAR yes 56335069
chr17 79548387 79548402 FOXP1 JASPAR yes 56335070
chr17 79548387 79548408 IRF1 JASPAR yes 56335071
chr17 79548388 79548403 FOXP1 JASPAR yes 56335072
chr17 79548391 79548406 PRDM1 JASPAR yes 56335073
chr17 79548391 79548406 STAT2 JASPAR yes 56335074
Genes associated with rs71367066[chr17:79548401], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More