EnhancerDB
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  3. rs71402249[chr2:38927643]
Enhancers that have rs71402249[chr2:38927643]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs71402249[chr2:38927643]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38927623 38927644 IRF1 JASPAR yes 73166669
chr2 38927630 38927645 FOXP1 JASPAR yes 73166672
chr2 38927641 38927650 VENTX JASPAR yes 73166673
chr2 38927641 38927655 ONECUT3 JASPAR yes 73166674
Genes associated with rs71402249[chr2:38927643], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More