EnhancerDB
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  3. rs71538249[chr6:34575869]
Enhancers that have rs71538249[chr6:34575869]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34574305 34581193 enh38949
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs71538249[chr6:34575869]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34575866 34575881 FOXP1 JASPAR yes 101224433
chr6 34575867 34575882 FOXP1 JASPAR yes 101224434
chr6 34575868 34575874 TBP TRANSFAC yes 101224435
chr6 34575868 34575883 FOXP1 JASPAR yes 101224436
chr6 34575868 34575889 IRF1 JASPAR yes 101224437
chr6 34575869 34575884 FOXP1 JASPAR yes 101224438
chr6 34575869 34575890 IRF1 JASPAR yes 101224439
Genes associated with rs71538249[chr6:34575869], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More