EnhancerDB
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  3. rs71549480[chr6:107170689]
Enhancers that have rs71549480[chr6:107170689]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 107161265 107207435 enh9283
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Liver Blood (OCI-LY7) Lung (A549) Stomach Muscle (A673) Placenta Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs71549480[chr6:107170689]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 107170681 107170693 FOXC2 JASPAR yes 104062081
chr6 107170687 107170699 MEF2A JASPAR yes 104062082
chr6 107170687 107170699 MEF2B JASPAR yes 104062083
chr6 107170687 107170699 MEF2D JASPAR yes 104062084
chr6 107170689 107170700 CDX2 JASPAR yes 104062085
Genes associated with rs71549480[chr6:107170689], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More