EnhancerDB
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Enhancers that have rs71569803[chr1:21342249]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21337448 21356675 enh106
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs71569803[chr1:21342249]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21342239 21342260 IRF1 JASPAR yes 27267016
chr1 21342243 21342258 FOXP1 JASPAR yes 27267018
chr1 21342243 21342264 IRF1 JASPAR yes 27267019
chr1 21342244 21342259 FOXP1 JASPAR yes 27267020
chr1 21342244 21342265 IRF1 JASPAR yes 27267021
chr1 21342245 21342260 FOXP1 JASPAR yes 27267022
chr1 21342245 21342266 IRF1 JASPAR yes 27267023
chr1 21342246 21342261 FOXP1 JASPAR yes 27267024
chr1 21342247 21342262 FOXP1 JASPAR yes 27267025
chr1 21342248 21342263 FOXP1 JASPAR yes 27267026
chr1 21342249 21342264 FOXP1 JASPAR yes 27267027
chr1 21342249 21342270 IRF1 JASPAR yes 27267028
Genes associated with rs71569803[chr1:21342249], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More