EnhancerDB
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  3. rs71580027[chr1:8512583]
Enhancers that have rs71580027[chr1:8512583]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71580027[chr1:8512583]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8512575 8512589 ONECUT1 JASPAR yes 26556212
chr1 8512575 8512589 ONECUT2 JASPAR yes 26556213
chr1 8512575 8512589 ONECUT3 JASPAR yes 26556214
chr1 8512577 8512593 POU4F3 JASPAR yes 26556215
chr1 8512578 8512588 CUX1 JASPAR yes 26556216
chr1 8512578 8512588 CUX2 JASPAR yes 26556217
chr1 8512579 8512593 POU4F1 JASPAR yes 26556218
Genes associated with rs71580027[chr1:8512583], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More