EnhancerDB
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  3. rs71677445[chr2:38935253]
Enhancers that have rs71677445[chr2:38935253]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs71677445[chr2:38935253]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38935248 38935263 MEF2C JASPAR yes 73168005
chr2 38935248 38935269 IRF1 JASPAR yes 73168006
chr2 38935249 38935261 POU3F1 JASPAR yes 73168007
chr2 38935249 38935261 POU3F2 JASPAR yes 73168008
chr2 38935249 38935262 POU3F3 JASPAR yes 73168009
chr2 38935249 38935264 MEF2A JASPAR yes 73168010
chr2 38935250 38935262 POU2F1 JASPAR yes 73168011
Genes associated with rs71677445[chr2:38935253], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More