EnhancerDB
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  3. rs71678097[chr1:210549207]
Enhancers that have rs71678097[chr1:210549207]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 210543485 210560329 enh27456
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs71678097[chr1:210549207]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 210549196 210549211 HNF1A JASPAR yes 35023736
chr1 210549197 210549210 HNF1B JASPAR yes 35023737
chr1 210549197 210549211 POU4F1 JASPAR yes 35023738
chr1 210549197 210549213 POU4F3 JASPAR yes 35023739
chr1 210549198 210549210 HNF1B JASPAR yes 35023740
chr1 210549200 210549210 GSX2 JASPAR yes 35023741
chr1 210549200 210549210 HOXB2 JASPAR yes 35023742
chr1 210549200 210549210 HOXB3 JASPAR yes 35023743
chr1 210549200 210549210 MNX1 JASPAR yes 35023744
chr1 210549200 210549210 POU6F1 JASPAR yes 35023745
chr1 210549200 210549211 HOXA10 JASPAR yes 35023746
chr1 210549201 210549209 LMX1A JASPAR yes 35023747
chr1 210549201 210549209 LMX1B JASPAR yes 35023748
chr1 210549201 210549209 NKX6-1 JASPAR yes 35023749
chr1 210549201 210549209 NKX6-2 JASPAR yes 35023750
chr1 210549201 210549209 VAX1 JASPAR yes 35023751
chr1 210549201 210549209 VAX2 JASPAR yes 35023752
chr1 210549201 210549209 VSX1 JASPAR yes 35023753
chr1 210549201 210549209 VSX2 JASPAR yes 35023754
chr1 210549202 210549223 IRF1 JASPAR yes 35023755
chr1 210549204 210549219 FOXP1 JASPAR yes 35023756
chr1 210549205 210549220 FOXP1 JASPAR yes 35023757
chr1 210549206 210549212 TBP TRANSFAC yes 35023758
chr1 210549206 210549221 FOXP1 JASPAR yes 35023759
chr1 210549207 210549222 FOXP1 JASPAR yes 35023760
Genes associated with rs71678097[chr1:210549207], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More