EnhancerDB
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  3. rs71727471[chr3:123324418]
Enhancers that have rs71727471[chr3:123324418]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 123311925 123328095 enh7496
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
chr3 123324068 123324437 vista42203
VISTA
Transcript factors that have rs71727471[chr3:123324418]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 123324028 123324418 EP300 UCSC Txn Factor no Conserved 108530099
chr3 123324412 123324433 IRF1 JASPAR yes 5329715
chr3 123324412 123324433 IRF1 JASPAR yes 71041029
chr3 123324413 123324428 FOXP1 JASPAR yes 5329717
chr3 123324413 123324428 FOXP1 JASPAR yes 71041031
chr3 123324414 123324435 IRF1 JASPAR yes 5329718
chr3 123324414 123324435 IRF1 JASPAR yes 71041032
chr3 123324415 123324430 FOXP1 JASPAR yes 5329719
chr3 123324415 123324430 FOXP1 JASPAR yes 71041033
chr3 123324416 123324437 IRF1 JASPAR yes 5329720
chr3 123324416 123324437 IRF1 JASPAR yes 71041034
chr3 123324417 123324432 FOXP1 JASPAR yes 5329721
chr3 123324417 123324432 FOXP1 JASPAR yes 71041035
chr3 123324418 123324433 FOXP1 JASPAR yes 5329722
chr3 123324418 123324433 FOXP1 JASPAR yes 71041036
Genes associated with rs71727471[chr3:123324418], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More