EnhancerDB
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Enhancers that have rs71848154[chr1:40397136]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40395645 40411775 enh11770
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Placenta Breast Lung (PC-9) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs71848154[chr1:40397136]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40397125 40397140 RUNX2 JASPAR yes 28300601
chr1 40397128 40397139 RUNX1 JASPAR yes 28300603
chr1 40397129 40397139 RUNX3 JASPAR yes 28300604
chr1 40397130 40397139 RUNX2 JASPAR yes 28300605
chr1 40397130 40397151 IRF1 JASPAR yes 28300606
chr1 40397131 40397152 IRF1 JASPAR yes 28300607
chr1 40397132 40397147 STAT2 JASPAR yes 28300608
chr1 40397135 40397150 FOXP1 JASPAR yes 28300609
chr1 40397136 40397151 FOXP1 JASPAR yes 28300610
Genes associated with rs71848154[chr1:40397136], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More