EnhancerDB
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  3. rs71880006[chr19:2522477]
Enhancers that have rs71880006[chr19:2522477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs71880006[chr19:2522477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2522469 2522483 GATA2 JASPAR yes 112068626
chr19 2522471 2522477 GATA1 TRANSFAC yes 112068627
chr19 2522471 2522479 GATA5 JASPAR yes 112068628
Genes associated with rs71880006[chr19:2522477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More