EnhancerDB
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  3. rs7212670[chr17:71286832]
Enhancers that have rs7212670[chr17:71286832]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 71282705 71302156 enh17360
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs7212670[chr17:71286832]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 71286540 71287018 SOX2 GTRD no Neural Stem Cells (H9) 108290922
chr17 71286562 71286988 SOX2 GTRD no Neural Stem Cells (H9) 108290923
chr17 71286747 71287247 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107689355
chr17 71286747 71287247 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108290924
chr17 71286817 71286832 FOXP1 JASPAR yes 55858618
chr17 71286824 71286838 TCF7L2 JASPAR yes 55858630
chr17 71286824 71286839 LEF1 JASPAR yes 55858631
chr17 71286829 71286835 SOX10 JASPAR yes 55858632
Genes associated with rs7212670[chr17:71286832], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More