EnhancerDB
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  3. rs7213198[chr17:55489017]
Enhancers that have rs7213198[chr17:55489017]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7213198[chr17:55489017]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55489011 55489022 FOXP2 JASPAR yes 54952285
chr17 55489011 55489025 FOXF2 JASPAR yes 54952286
chr17 55489013 55489024 FOXA1 JASPAR yes 54952287
chr17 55489017 55489022 GATA2 JASPAR yes 54952288
Genes associated with rs7213198[chr17:55489017], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More