EnhancerDB
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  3. rs7213882[chr17:41524624]
Enhancers that have rs7213882[chr17:41524624]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs7213882[chr17:41524624]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41520571 41526147 ZNF143 GTRD no Epithelial (MCF-7) 21760302
chr17 41520594 41525787 ZNF143 GTRD no Epithelial (MCF-7) 21760304
chr17 41520863 41526178 ZNF143 GTRD no Epithelial (MCF-7) 21760316
chr17 41523363 41525123 ZNF143 GTRD no Epithelial (MCF-7) 21760403
chr17 41523419 41524927 ZNF143 GTRD no Epithelial (MCF-7) 21760404
chr17 41523541 41524874 ZNF143 GTRD no Epithelial (MCF-7) 21760406
chr17 41523624 41525585 ZNF143 GTRD no Epithelial (MCF-7) 21760408
chr17 41523647 41525933 ZNF143 GTRD no Epithelial (MCF-7) 21760411
chr17 41523659 41525014 ZNF143 GTRD no Epithelial (MCF-7) 21760412
chr17 41523660 41526159 ZNF143 GTRD no Epithelial (MCF-7) 21760413
chr17 41523663 41525001 ZNF143 GTRD no Epithelial (MCF-7) 21760414
chr17 41523681 41524793 ZNF143 GTRD no Epithelial (MCF-7) 21760415
chr17 41523710 41524766 ZNF143 GTRD no Epithelial (MCF-7) 21760416
chr17 41523761 41524720 ZNF143 GTRD no Epithelial (MCF-7) 21760417
chr17 41523761 41524932 ZNF143 GTRD no Epithelial (MCF-7) 21760418
chr17 41523765 41524833 ZNF143 GTRD no Epithelial (MCF-7) 21760419
chr17 41523765 41524837 ZNF143 GTRD no Epithelial (MCF-7) 21760420
chr17 41523770 41524764 ZNF143 GTRD no Epithelial (MCF-7) 21760421
chr17 41523835 41524825 ZNF143 GTRD no Epithelial (MCF-7) 21760422
chr17 41524031 41525848 ZNF143 GTRD no Epithelial (MCF-7) 21760423
chr17 41524071 41524798 ZBTB33 GTRD no Lung (A549) 21760424
chr17 41524156 41524798 ZNF143 GTRD no Epithelial (MCF-7) 21760425
chr17 41524326 41524751 ZNF143 GTRD no Epithelial (MCF-7) 21760426
chr17 41524538 41525141 ZNF143 GTRD no Epithelial (MCF-7) 21760427
chr17 41524614 41524628 GLIS3 JASPAR yes 54347734
Genes associated with rs7213882[chr17:41524624], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 40925454 40931617 + VPS25 ENSG00000131475.2 40925454 593007 Heart 0.208114 15876