EnhancerDB
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  3. rs7216334[chr17:55501831]
Enhancers that have rs7216334[chr17:55501831]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7216334[chr17:55501831]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55501555 55502011 ZNF274 GTRD no Liver (HepG2) 21773516
chr17 55501555 55502011 ZNF274 GTRD no Liver (HepG2) 108273983
chr17 55501562 55502045 ZNF143 GTRD no Epithelial (MCF-7) 108273984
chr17 55501660 55502057 TCF7L2 GTRD no Colon (HCT116) 108273985
chr17 55501661 55502000 TCF7L2 GTRD no Colon (HCT116) 108273986
chr17 55501668 55502047 TCF7L2 GTRD no Colon (HCT116) 108273987
chr17 55501748 55502039 ZNF143 GTRD no Epithelial (MCF-7) 108273988
chr17 55501818 55501839 IRF1 JASPAR yes 54954044
chr17 55501820 55501835 STAT2 JASPAR yes 54954045
chr17 55501822 55501833 RUNX1 JASPAR yes 54954046
chr17 55501822 55501836 IRF7 JASPAR yes 54954047
chr17 55501822 55501837 IRF9 JASPAR yes 54954048
chr17 55501823 55501833 RUNX3 JASPAR yes 54954049
chr17 55501824 55501833 RUNX2 JASPAR yes 54954050
chr17 55501829 55501840 E2F6 JASPAR yes 54954051
Genes associated with rs7216334[chr17:55501831], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More