EnhancerDB
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  3. rs7217770[chr17:38696001]
Enhancers that have rs7217770[chr17:38696001]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7217770[chr17:38696001]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38695580 38696259 TCF7L2 GTRD no Colon (HCT116) 21755173
chr17 38695842 38696505 ZNF274 GTRD no Blood (GM12878) 21755174
chr17 38695867 38696338 ZNF274 GTRD no Blood (GM12878) 21755175
chr17 38695929 38696493 ZNF274 GTRD no Blood (GM12878) 21755176
chr17 38696000 38696014 TLX1 JASPAR yes 54223770
Genes associated with rs7217770[chr17:38696001], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More