EnhancerDB
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  3. rs72197948[chr1:27923846]
Enhancers that have rs72197948[chr1:27923846]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs72197948[chr1:27923846]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27923835 27923855 TBX19 JASPAR yes 27714294
chr1 27923837 27923853 T JASPAR yes 27714295
chr1 27923838 27923846 HOXA5 JASPAR yes 27714296
chr1 27923842 27923850 HOXA5 JASPAR yes 27714297
chr1 27923844 27923864 RREB1 JASPAR yes 27714298
chr1 27923846 27923866 RREB1 JASPAR yes 27714299
Genes associated with rs72197948[chr1:27923846], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More