EnhancerDB
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  3. rs72209677[chr1:232769074]
Enhancers that have rs72209677[chr1:232769074]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs72209677[chr1:232769074]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232769068 232769089 IRF1 JASPAR yes 36180053
chr1 232769069 232769090 IRF1 JASPAR yes 36180054
chr1 232769070 232769091 IRF1 JASPAR yes 36180055
chr1 232769071 232769086 FOXP1 JASPAR yes 36180056
chr1 232769071 232769092 IRF1 JASPAR yes 36180057
chr1 232769073 232769088 FOXP1 JASPAR yes 36180058
chr1 232769074 232769089 FOXP1 JASPAR yes 36180059
Genes associated with rs72209677[chr1:232769074], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More