EnhancerDB
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  3. rs7222478[chr17:38671319]
Enhancers that have rs7222478[chr17:38671319]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7222478[chr17:38671319]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38670919 38671693 TCF7L2 GTRD no Colon (HCT116) 21754343
chr17 38670984 38671749 TCF7L2 GTRD no Colon (HCT116) 21754344
chr17 38670996 38672332 TCF7L2 GTRD no Colon (HCT116) 21754345
chr17 38671043 38673614 ZNF274 GTRD no Bone Marrow (K562) 21754346
chr17 38671053 38671570 TCF7L2 GTRD no Colon (HCT116) 21754347
chr17 38671062 38671746 TCF7L2 GTRD no Colon (HCT116) 21754348
chr17 38671167 38671582 ZNF274 GTRD no Blood (GM12878) 21754349
chr17 38671171 38671427 ZNF274 GTRD no Blood (GM12878) 21754350
chr17 38671193 38673444 ZNF274 GTRD no Liver (HepG2) 21754351
chr17 38671193 38677697 ZNF274 GTRD no Liver (HepG2) 21754352
chr17 38671193 38677697 ZNF274 GTRD no Liver (HepG2) 108255234
chr17 38671278 38673420 ZNF274 GTRD no Liver (HepG2) 21754353
chr17 38671312 38671324 INSM1 JASPAR yes 54219962
chr17 38671317 38671322 SP1 TRANSFAC yes 54219963
Genes associated with rs7222478[chr17:38671319], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More