EnhancerDB
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  3. rs7222590[chr17:39815461]
Enhancers that have rs7222590[chr17:39815461]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39800139 39815735 enh17152
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs7222590[chr17:39815461]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39815449 39815466 RARA JASPAR yes 54269562
chr17 39815455 39815471 SOX4 JASPAR yes 54269563
chr17 39815461 39815465 LFA1 TRANSFAC yes 54269564
Genes associated with rs7222590[chr17:39815461], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 39775689 39781094 - KRT17 ENSG00000128422.11 39781094 34367 Esophagus 0.115689 15835