EnhancerDB
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  3. rs7224712[chr17:42874218]
Enhancers that have rs7224712[chr17:42874218]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42867613 42875555 enh17184
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs7224712[chr17:42874218]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42874144 42874758 TCF7L2 GTRD no Colon (HCT116) 21762982
chr17 42874207 42874219 MEF2A JASPAR yes 54414604
chr17 42874207 42874219 MEF2B JASPAR yes 54414605
chr17 42874207 42874219 MEF2D JASPAR yes 54414606
chr17 42874208 42874218 MEF2A JASPAR yes 54414607
chr17 42874217 42874230 SMAD2 JASPAR yes 54414609
Genes associated with rs7224712[chr17:42874218], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More