EnhancerDB
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  3. rs7225854[chr17:39069844]
Enhancers that have rs7225854[chr17:39069844]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs7225854[chr17:39069844]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39068930 39070187 ZNF143 GTRD no Epithelial (MCF-7) 21757218
chr17 39068930 39070187 ZNF143 GTRD no Epithelial (MCF-7) 108257931
chr17 39068932 39070569 ZBTB33 GTRD no Lung (A549) 21757219
chr17 39068932 39070569 ZBTB33 GTRD no Lung (A549) 108257932
chr17 39068942 39070399 ZBTB33 GTRD no Lung (A549) 21757220
chr17 39068942 39070399 ZBTB33 GTRD no Lung (A549) 108257933
chr17 39068972 39070166 ZNF274 GTRD no Cervix (HeLa-S3) 21757221
chr17 39068972 39070166 ZNF274 GTRD no Cervix (HeLa-S3) 108257934
chr17 39069023 39070231 ZNF143 GTRD no Epithelial (MCF-7) 21757222
chr17 39069023 39070231 ZNF143 GTRD no Epithelial (MCF-7) 108257935
chr17 39069071 39070007 ZNF274 GTRD no Blood (GM12878) 108257937
chr17 39069088 39070107 ZBTB33 GTRD no Lung (A549) 21757224
chr17 39069088 39070107 ZBTB33 GTRD no Lung (A549) 108257938
chr17 39069088 39070163 ZBTB33 GTRD no Lung (A549) 21757225
chr17 39069088 39070163 ZBTB33 GTRD no Lung (A549) 108257939
chr17 39069089 39070137 ZNF274 GTRD no Bone Marrow (K562) 108257940
chr17 39069113 39070007 ZNF274 GTRD no Blood (GM12878) 108257941
chr17 39069119 39069872 ZNF274 GTRD no Blood (GM12878) 108257942
chr17 39069120 39070010 ZNF274 GTRD no Liver (HepG2) 21757226
chr17 39069120 39070010 ZNF274 GTRD no Liver (HepG2) 108257943
chr17 39069132 39069874 ZNF274 GTRD no Bone Marrow (K562) 108257945
chr17 39069133 39069941 ZNF274 GTRD no Bone Marrow (K562) 108257946
chr17 39069160 39069938 ZNF274 GTRD no Blood (GM12878) 108257948
chr17 39069179 39070104 ZNF143 GTRD no Epithelial (MCF-7) 21757228
chr17 39069179 39070104 ZNF143 GTRD no Epithelial (MCF-7) 108257950
chr17 39069183 39069995 ZNF274 GTRD no Bone Marrow (K562) 108257951
chr17 39069186 39069844 ZNF274 GTRD no Blood (GM12878) 108257953
chr17 39069191 39070027 ZNF274 GTRD no Liver (HepG2) 21757229
chr17 39069191 39070027 ZNF274 GTRD no Liver (HepG2) 108257954
chr17 39069200 39069869 ZBTB33 GTRD no Lung (A549) 21757230
chr17 39069200 39069869 ZBTB33 GTRD no Lung (A549) 108257956
chr17 39069200 39069917 ZNF274 GTRD no Cervix (HeLa-S3) 21757231
chr17 39069200 39069917 ZNF274 GTRD no Cervix (HeLa-S3) 108257957
chr17 39069254 39069901 ZNF274 GTRD no Liver (HepG2) 21757236
chr17 39069254 39069901 ZNF274 GTRD no Liver (HepG2) 108257966
chr17 39069265 39069902 ZNF274 GTRD no Blood (GM12878) 108257971
chr17 39069265 39069960 ZNF274 GTRD no Blood (GM12878) 108257972
chr17 39069266 39069891 ZNF274 GTRD no Liver (HepG2) 21757241
chr17 39069266 39069891 ZNF274 GTRD no Liver (HepG2) 108257973
chr17 39069290 39069865 ZNF274 GTRD no Bone Marrow (K562) 108257981
chr17 39069297 39070102 ZNF143 GTRD no Epithelial (MCF-7) 21757247
chr17 39069297 39070102 ZNF143 GTRD no Epithelial (MCF-7) 108257983
chr17 39069307 39069867 ZNF143 GTRD no Epithelial (MCF-7) 21757248
chr17 39069307 39069867 ZNF143 GTRD no Epithelial (MCF-7) 108257987
chr17 39069417 39070100 ZNF143 GTRD no Epithelial (MCF-7) 21757255
chr17 39069421 39070086 ZNF143 GTRD no Epithelial (MCF-7) 21757256
chr17 39069839 39069853 NR2F1 JASPAR yes 54243818
Genes associated with rs7225854[chr17:39069844], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More