EnhancerDB
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  3. rs72278370[chr17:60172346]
Enhancers that have rs72278370[chr17:60172346]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60161225 60181195 enh32257
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs72278370[chr17:60172346]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60170089 60172461 ZNF274 GTRD no Liver (HepG2) 21777693
chr17 60171474 60172487 ZNF274 GTRD no Liver (HepG2) 21777715
chr17 60172336 60172346 ALX3 JASPAR yes 55181248
chr17 60172336 60172346 ESX1 JASPAR yes 55181249
chr17 60172336 60172346 GSX2 JASPAR yes 55181250
chr17 60172336 60172346 HESX1 JASPAR yes 55181251
chr17 60172336 60172346 LHX6 JASPAR yes 55181252
chr17 60172336 60172346 MIXL1 JASPAR yes 55181253
chr17 60172336 60172346 MNX1 JASPAR yes 55181254
chr17 60172336 60172346 NOTO JASPAR yes 55181255
chr17 60172336 60172346 RAX JASPAR yes 55181256
chr17 60172337 60172347 POU6F2 JASPAR yes 55181267
chr17 60172338 60172349 PHOX2A JASPAR yes 55181268
chr17 60172338 60172349 PROP1 JASPAR yes 55181269
chr17 60172340 60172361 IRF1 JASPAR yes 55181270
chr17 60172342 60172357 PRDM1 JASPAR yes 55181272
chr17 60172342 60172357 STAT2 JASPAR yes 55181273
chr17 60172342 60172363 IRF1 JASPAR yes 55181274
chr17 60172345 60172360 FOXP1 JASPAR yes 55181275
chr17 60172346 60172361 FOXP1 JASPAR yes 55181276
Genes associated with rs72278370[chr17:60172346], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More